Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015831439.1_cds_XP_016504524.1_17959
CDS Infomation

[gene=LOC107822486] [db_xref=GeneID:107822486] [protein=low-temperature-induced cysteine proteinase-like] [protein_id=XP_016504524.1] [location=join(19831..20332,21542..21777,21876..22013,22106..22374,22531..22759,23131..23274)] [gbkey=CDS]
Sequence

ATGGGAAGCACACAGATTCCCTATCGACACTTCCTTCTTTTCCCACTTTTCTTGATCTTA
GCTGCATTATACTCTCAAGTTTCTGCTTTTACTACAGATTTTCCAATACTAGACAGACCA
ACTGAGTTTCTTTCAGAAGAAAGAGTATTCCAAATTTTCCAAGAATGGAAACAGAAGCAT
GGGAAATTTTACAAGAATGAGAAAGAAGAAGAAATGAGGTTGGAGATTTTTAAAACGAAT
GTGAAATATATAGTGGGGAAAAACTCCAAGAGGAAGCCAGATTCAGACCATTTGGTTGGT
CTGACCAAGTTTGCTGATATGAGCAATGAGGAGTTTAGGCAAGTTCATACTTCAAAGATT
AAGATACCCTTTAACAAGAGAAAGACTATTCAAATGAGGAGTGTGGAGATAAAGCCTTCA
ACAACTTCTTGTGATGTTCCTCCATCAAAGGATTGGAGAAAACATGGGGCTGTCACTGAG
GTCAAGGATCAAGATCGATGTGGAGCTTGCTGGGCATTCTCGGCGTGTGGAGCAATGGAG
GGACTAAATGCGATTGTCACTGGTGAACTTATTAGCCTTTCTGAACAAGAACTTATCAAT
TGTGACAACTCATACAATACTGGTTGCGATGGTGGACTTATGGACCCTGCTTTTGAATGG
GTGATGAACAATGGTGGCATTGATTCAGAAGCTGATTATCCATACAGTGCCTCTCAAGGC
CGTTGCAATTATGACAAGGTGAACCATAAGGTTGTAACAATTGATGGATACCAAGATGTT
CCAGAGGACGAGAATGCCCTTCTTTGTGCTGTTGCACAACAACCTGTTAGTGTAGGCATT
GACGGAAGCAGCCTGGATTTTCAACTTTATAGAGGGGGAATCTATGATGGAGAATGCTCT
AGCAATTCAGATGACTTATCCCATGCAGTACTAATAGTAGGATATGGTTCTAAAGGAGAT
GATGACTATTGGATAATCAAGAACTCATGGGGTACAACATGGGGAATGGAGGGGTATGCA
TACATAAGAAGGAACACTTATTTGCCATATGGGGTTTGTGCCATTAATTCGTTGGCTTCA
TATCCAACAAAAGAAGCGTCTTCAGCACCATCCCCTTATCCGTCCCCAGCCGTTCCACCA
CCTCCNCCGCCACCCCCTCCGCCCCCTCCACCACCTTCTCCAAAACCAAGTGAATGTGGA
GACTTTTATTACTGTCCAGAAGATCAAACATGCTGCTGTGAGTTGCACTTCTTTGGCATA
TGCTTCATTCAGGGATGCTGTCCTTATGAAAATGGTGTTTGCTGTCATGGATCAGAATTT
TGTTGCCCAGCTAACTATCCCATTTGTGATGTTTATGAGGGTCTCTGCCTCAAGGATTAC
CGAGACAATATTGGAGTGGCAGCAAGGAAGAAAAGAATGGCCAAACACAAGTTACCATGG
AGAGCTAACACTGAAGCAACAGAGGAAAGGGACCAAACTCTGAAATGGAAGAGAAATCAT
GTTGCTGCAATGCGTTGA

Peptide Sequence

PEP ID

XP_016504524.1
PEP Infomation

PREDICTED: low-temperature-induced cysteine proteinase-like [Nicotiana tabacum]
Sequence

MGSTQIPYRHFLLFPLFLILAALYSQVSAFTTDFPILDRPTEFLSEERVFQIFQEWKQKH
GKFYKNEKEEEMRLEIFKTNVKYIVGKNSKRKPDSDHLVGLTKFADMSNEEFRQVHTSKI
KIPFNKRKTIQMRSVEIKPSTTSCDVPPSKDWRKHGAVTEVKDQDRCGACWAFSACGAME
GLNAIVTGELISLSEQELINCDNSYNTGCDGGLMDPAFEWVMNNGGIDSEADYPYSASQG
RCNYDKVNHKVVTIDGYQDVPEDENALLCAVAQQPVSVGIDGSSLDFQLYRGGIYDGECS
SNSDDLSHAVLIVGYGSKGDDDYWIIKNSWGTTWGMEGYAYIRRNTYLPYGVCAINSLAS
YPTKEASSAPSPYPSPAVPPPPPPPPPPPPPPSPKPSECGDFYYCPEDQTCCCELHFFGI
CFIQGCCPYENGVCCHGSEFCCPANYPICDVYEGLCLKDYRDNIGVAARKKRMAKHKLPW
RANTEATEERDQTLKWKRNHVAAMR

Transcript Sequence

Gene sequence data has not been registered.